RESULTS:
1 - 16 of 16 for ""yeast species""
Candida yunnanensis sp. nov. and Candida parablackwelliae sp. nov., two yeast species in the Candida albicans/Lodderomyces clade
During studies on the yeast communities associated with rotting wood in the Xishuangbanna Tropical Rainforest in PR China four novel yeast strains were found. Phylogenetic analysis based on the concatenated sequences of the D1/D2 domains of the large subunit rRNA gene and the ITS regions showed that these strains represented two novel species in the Candida albicans/Lodderomyces clade. The novel species represented by strains NYNU 17948 and NYNU 17981 formed a clade with Candida maltosa and Candida baotianmanensis with 1–1.8% sequence divergence in the D1/D2 domains and 8.9–10% sequence divergence in the ITS regions. The other novel species represented by NYNU 17105 and NYNU 17763 is most closely related to Candida blackwelliae with 0.7 % sequence divergence in the D1/D2 domains and 6.9 % sequence divergence in the ITS regions. The two novel species could be distinguished from their closest described species in terms of physiological traits. The two novel species are described as Candida yunnanensis sp. nov. (holotype NYNU 17948) and Candida parablackwelliae sp. nov. (holotype NYNU 17763).
Saturnispora galanensis sp. nov., a yeast species isolated from rotting wood
Three strains of a novel yeast species were isolated from rotting wood in the Xishuangbanna Tropical Rainforest Yunnan Province PR China. Sequence analysis of the D1/D2 domains of the large subunit rRNA gene and the internal transcribed spacer (ITS) regions showed that the novel species represents a member of the genus Saturnispora. It differed from its closest known species Saturnispora sekii CBS 10931T by 1.3 % nucleotide substitutions in the D1/D2 domains and by 2.2 % nucleotide substitutions in the ITS regions respectively. In contrast to Saturnispora sekii the novel yeast species was unable to assimilate glycerol dl-lactate succinate and citrate and grow at 37 °C. The name Saturnispora galanensis sp. nov. is proposed to accommodate these strains with NYNU 1797 as the holotype.
Kazachstania jinghongensis sp. nov. and Kazachstania menglunensis f.a., sp. nov., two yeast species isolated from rotting wood
Five yeast strains were isolated from rotting wood samples collected in the Xishuangbanna Tropical Rainforest Yunnan Province PR China. Phylogenetic analysis of the D1/D2 domains of the large subunit rRNA gene indicated that these strains represent two novel species of the genus Kazachstania. Kazachstania jinghongensis sp. nov. produces one to two spherical ascospores per ascus and is most closely related to Kazachstania lodderae and Kazachstania spencerorum. Kazachstania jinghongensis sp. nov. differed from the type strains of the two latter species by 13–24 substitutions in the D1/D2 domains and by 39–56 substitutions in the ITS regions. Kazachstania menglunensis f.a. sp. nov. is a member of the Kazachstania jiainica subclade but the formation of ascospores was not observed on various sporulation media. Kazachstania menglunensis sp. nov. differed from other members of the subclade by 23–26 substitutions in the D1/D2 domains and by more than 67 substitutions in the ITS regions. The holotype of Kazachstania jinghongensis sp. nov. is NYNU 17944 (CBS 15232) and the holotype of Kazachstania menglunensis sp. nov. is NYNU 18913 (CBS 16054).
Metschnikowia baotianmanensis f.a., sp. nov., a new yeast species isolated from the gut of the rhinoceros beetle Allomyrina dichotoma
Four strains NYNU 15610 NYNU 15612 NYNU 15613 and NYNU 15615 of a novel ascomycetous yeast were isolated from the gut of Allomyrina dichotoma (Coleoptera: Scarabeidae) collected from two different localities in Henan Province Central PR China. The four strains shared identical sequences in both of the D1/D2 domains of the large subunit rRNA gene and the internal transcribed spacer regions. Sequence analyses revealed that this novel species represents a member of the genus Metschnikowia. It differed from its closest known species Metschnikowia zobellii Metschnikowiaaustralis and Metschnikowia bicuspidata by 8.4–9.2 % sequence divergence (33–40 nt substitutions and 7–12 gaps over 509 bases) in the D1/D2 sequences. The formation of ascospores was not observed on various sporulation media. In contrast to M. zobellii M. australis and M. bicuspidata the novel yeast species was unable to assimilate succinate ethanol ethylamine cadaverine and 10 % NaCl plus 5 % glucose but was able to grow in vitamin-free medium. The name Metschnikowia baotianmanensis f.a. sp. nov. is proposed to accommodate these strains with NYNU 15613 as the holotype.
Yarrowia brassicae f.a., sp. nov., a new yeast species from traditional Chinese sauerkraut
Two strains of a novel yeast species were isolated from traditional Chinese sauerkraut samples collected in Nanyang Henan Province central China. Phylogenetic analysis based on the concatenated sequences of the D1/D2 domains of the large subunit rRNA gene and the internal transcribed spacer (ITS) regions showed that these strains belong to the Yarrowia clade with seven clones of uncultured Yarrowia as their closest phylogenetic neighbours. They differed from their closest known species Yarrowia divulgata CBS 11013T by 3.2 % sequence divergence (14 substitutions and 2 gaps) in the D1/D2 domains and by 5.4 % sequence divergence (12 substitutions and 5 gaps) in the ITS regions. The two strains of novel species reproduced asexually and no ascospores could be found. The name Yarrowia brassicae f.a. sp. nov. is proposed to accommodate these strains with NYNU 17218T (=CICC 33263T=CBS 15225T) as the type strain.
Cyberlindnera xishuangbannaensis f.a., sp. nov., a yeast isolated from rotting wood
Three strains representing a novel species of yeast were isolated from samples of rotting wood collected from Xishuangbanna Tropical Rainforest in Yunnan Province PR China. Phylogenetic analysis based on the concatenated sequences of the internal transcribed spacer (ITS) region and the D1/D2 domains of the large subunit (LSU) rRNA gene revealed that the novel species is a member of the genus Cyberlindnera although the formation of ascospores was not observed. The novel species was related most closely to the type strain of the species Candida pattaniensis but they had a 0.5 % sequence divergence (3 substitutions 0 gap) in the D1/D2 domain and a 5.4 % sequence divergence (21 substitutions 10 gaps) in the ITS region. The novel species could also be differentiated from the closely related species by some biochemical and physiological characteristics. The species name Cyberlindnera xishuangbannaensis f.a. sp. nov. is proposed to accommodate these strains with NYNU 16752T (=CICC 33163T=CBS 14692T) designated as the type strain. The MycoBank number is MB 822199.
Sugiyamaella xiaguanensis f.a., sp. nov., a yeast species isolated from rotting wood
Three strains representing a novel yeast species Sugiyamaella xiaguanensis f.a. sp. nov. (type strain NYNU 161041T=CICC 33167T=CBS 14696T) were isolated from rotting wood samples collected in Henan and Yunnan Provinces PR China. The novel species is able to assimilate cellobiose salicin and d-xylose which was typical of the species of the genus Sugiyamaella. Analysis of the D1/D2 domains of the large subunit rRNA gene and internal transcribed spacer regions of these strains showed that this species was related to Sugiyamaella lignohabitans and Sugiyamaella marionensis its closest relatives. Su. xiaguanensis sp. nov. differed by 1.4 % nucleotide substitutions from Su. lignohabitans and by 1.9 % nucleotide substitutions from Su. marionensis in the D1/D2 sequences. The ITS sequences of Su. xiaguanensis sp. nov. displayed more than 6.5 % nucleotide substitutions from the latter two species showing that it is a genetically separate species.
Pichia nanzhaoensis sp. nov. and Pichia paraexigua f.a., sp. nov., two yeast species isolated from rotting wood
Four yeast strains were isolated from rotting wood samples collected in the Baotianman Nature Reserve in Henan Province Central China. On the basis of sequence analysis of the D1/D2 domains of the large subunit rRNA gene and the internal transcribed spacer regions they were suggested to be two novel species of the genus Pichia. Pichia nanzhaoensis sp. nov. produces one to four spherical ascospores per ascus and is most closely related to Candida pseudolambica. Pichia paraexigua f.a. sp. nov. is a sister taxa to Pichia exigua but the formation of ascospores was not observed on various sporulation media. P. nanzhaoensis sp. nov. can weakly assimilate inulin whereas P. paraexigua sp. nov. can weakly assimilate d-glucosamine. The type strain of Pichia nanzhaoensis is NYNU 178136T (=CICC 33279T=CBS 15346T) and the type strain of Pichia paraexigua is NYNU 178135T (=CICC 33278T=CBS 15237T).
Zygotorulaspora cariocana sp. nov., a yeast species isolated from tree bark in Brazil
Six strains of a novel yeast species were isolated from tree bark collected in the Atlantic Forest and the Amazon Rainforest in Brazil. Analyses of the sequences of D1/D2 domains of the large subunit rRNA gene showed that the strains belong to a species in the genus Zygotorulaspora. The species differed by 5.54 % sequence divergence (25 substitutions and five indels out of 542 bp) in the D1/D2 sequences from Zygotorulaspora mrakii its closest relative. The ITS sequence of the type strain of the novel species differs by 27–69 nucleotide substitutions/indels from the other Zygotorulaspora species. The novel species is able to grow on trehalose maltose l-sorbose inulin and at 37 °C which are negative in Z. mrakii. The name Zygotorulaspora cariocana sp. nov. is proposed. The holotype of Z. cariocana sp. nov. is CBS 16118T. The MycoBank number is MB 833702.
Hyphopichia xiaguanensis f.a., sp. nov., an ascomycetous yeast species isolated from plant leaves
Two strains representing a novel yeast species were isolated from plant leaves collected in the Baotianman Nature Reserve in Henan Province central China. Phylogenetic analysis based on the concatenated sequences of the internal transcribed spacer (ITS) region (ITS1-5.8S–ITS2) and the D1/D2 domain of the large subunit rRNA gene revealed that the novel species belonged to the genus Hyphopichia although the formation of ascospores was not observed. The novel species was related most closely to Hyphopichia paragotoi CBS 13913T but they differed by 0.9 % sequence divergence (five substitutions) in the D1/D2 domain and by 3.7 % sequence divergence (seven substitutions and eight gaps) in the ITS region. Furthermore the novel species can also be differentiated from the closely related species in some biochemical and physiological characteristics. The species name of Hyphopichia xiaguanensis f.a. sp. nov. (Holotype CBS 16668 Mycobank MB 842425) is proposed to accommodate strains NYNU 20899T and NYNU 20914.
Torulaspora jiuxiensis sp. nov., a novel yeast species isolated from rotting wood
Two strains of a novel ascomycetous yeast species were isolated from rotting wood samples collected in Jiuxi Mountain Forest Park in Yunnan Province southwest China. Both strains formed one or two spherical ascospores in persistent asci. Phylogenetic analysis of the concatenated sequences of the internal transcribed spacer (ITS) region (ITS1-5.8S–ITS2) and the D1/D2 domain of the large subunit rRNA gene revealed that the novel strains represented a phylogenetically distinct species belonging to the genus Torulaspora. This novel species differed from the type strains of the closest known species Torulaspora nypae and Torulaspora maleeae by 0.9 and 1.2 % nucleotide substitutions in the D1/D2 domain and 5.3 and 6 % nucleotide substitutions in the ITS region respectively. The novel species can also be distinguished from T. nypae and T. maleeae in terms of the ability to assimilate ribitol succinate and citrate and its ability to grow at 37 °C. The species name of Torulaspora jiuxiensis sp. nov. is proposed with holotype CBS 16004T (Mycobank MB 844535).
Moniliella aeria sp. nov., a novel yeast isolated from the air of a Wuliangye baijiu-making workshop
During an investigation of the diversity of airborne yeasts in a famous Chinese baijiu fermentation workshop two yeast strains were isolated from the air of the Wuliangye 501# baijiu-making workshop in Yibin Sichuan Province PR China and subjected to taxonomic analysis. The results of phylogenetic analysis of two regions of the rRNA gene cluster the D1/D2 domains of the large subunit (LSU) rRNA gene and the internal transcribed spacer (ITS) region indicated that these strains represented a novel species of the genus Moniliella distinct from closely related species. The similarity between the novel species and the most closely related known species Moniliella dehoogii was 94.1 % for the D1/D2 LSU rRNA gene (30 substitutions and 12 indels out of 556 bp) and 95.6 % for the ITS region (9 substitutions and 6 indels out of 475 bp). In contrast with M. dehoogii this novel species was able to assimilate d-ribose l-arabinose d-arabinose cellobiose d-glucono-15-lactone dl-lactate citrate 12-propanediol 23-butanediol and ethanol but was unable to ferment raffinose or assimilate inulin. On the basis of the results of phylogenetic analysis and the physiological characteristics these investigated strains represent a novel species of the genus Moniliella for which the name Moniliella aeria sp. nov. is proposed. Its holotype is CGMCC 20235T and the MycoBank number is MB840188.
Hanseniaspora menglaensis f.a., sp. nov., a novel apiculate yeast species isolated from rotting wood
Two apiculate strains (NYNU 181072 and NYNU 181083) of a bipolar budding yeast species were isolated from rotting wood samples collected in Xishuangbanna Tropical Rainforest in Yunnan Province southwest PR China. On the basis of phenotypic characteristics and the results of phylogenetic analysis of the D1/D2 domain of the large subunit (LSU) rRNA internal transcribed spacer (ITS) region and the actin (ACT1) gene the two strains were found to represent a single novel species of the genus Hanseniaspora for which the name Hanseniaspora menglaensis f.a. sp. nov. (holotype CICC 33364T; MycoBank MB 847437) is proposed. In the phylogenetic tree H. menglaensis sp. nov. showed a close relationship with Hanseniaspora lindneri Hanseniaspora mollemarum Hanseniaspora smithiae and Hanseniaspora valbyensis. H. menglaensis sp. nov. differed from H. lindneri the most closely related known species by 1.2 % substitutions in the D1/D2 domain 2.5 % substitutions in the ITS region and 5.4 % substitutions in the ACT1 gene respectively. Physiologically H. menglaensis sp. nov. can also be distinguished from H. lindneri by its ability to assimilate d-gluconate.
Danielozyma pruni sp. nov., an asexual yeast species isolated from insect frass
Two strains (NYNU 218101 and NYNU 218104) of an asexual yeast species were isolated from insect frass collected in insect tunnels of red leaf plum trees in the Henan Province central China. Molecular phylogenetic analysis of the D1/D2 domain of the large subunit rRNA gene and the internal transcribed spacer (ITS) region showed that these two strains belonged to the genus Danielozyma with Danielozyma litseae as the closest known species. They differed from the type strain of D. litseae by 0.6 % substitutions (three substitutions and one gap) in the D1/D2 domain and by 5.1 % substitutions (19 substitutions and six gaps) in the ITS region respectively. When compared with the partial ACT1 TEF1 and RPB1 gene sequences they differed by 3 % (26 substitutions) 2.7 % (25 substitutions) and 9 %(54 substitutions) from D. litseae NRRL YB-3246T in these regions. Physiologically they also differed from its closest known species D. litseae based on the ability to assimilate inulin and galactitol as well as to grow in 0.1 % cycloheximide and its inability to ferment maltose and raffinose. In order to classify the two new isolates based on morphological and molecular evidence we proposed the description of a novel species Danielozyma pruni sp. nov. with strain JCM 35735T as holotype (Mycobank MB 849101).
Spencermartinsiella henanensis fa., sp. nov., a novel yeast species isolated from rotting wood
Two yeast strains (NYNU 211162 and NYNU 211275) were isolated from rotting wood collected in the Baotianman Nature Reserve Henan Province central China. Phylogenetic analysis of the D1/D2 domain of the large subunit (LSU) rRNA gene and the internal transcribed spacer (ITS) region revealed that the strains represent a phylogenetically distinct species within the genus Spencermartinsiella. The name Spencermartinsiella henanensis fa. sp. nov. is proposed for this species with holotype CICC 33543T (Mycobank MB 851142). S. henanensis sp. nov. differed by only 3 nt (~0.5 %) substitutions from the closest known species S. europaea NCAIM Y.01817T in the D1/D2 domain but by 33 nt (~6 %) substitutions 34 nt (~3.8 %) substitutions 30 nt (~5.6 %) substitutions and 75 nt (~9.9 %) substitutions in the ITS region and the partial TEF1 COXII and RPB2 genes. Additionally S. henanensis sp. nov. can be physiologically distinguished from S. europaea by its ability to assimilate inulin inability to assimilate ethylamine and cadaverine and incapability of growth at 30 °C.
Naohidea akebiae fa. sp. nov., an anamorphic basidiomycete yeast species
A novel basidiomycete yeast species represented by strain NYNU 2211328 was isolated from a leaf of Akebia trifoliata collected from the Baotianman Nature Reserve in Henan Province central China. Phylogenetic analysis of the D1/D2 domain of the large subunit rRNA gene and the internal transcribed spacer (ITS) region suggested that this strain is closely related to Naohidea sebacea CBS 8477 exhibiting the similarity values of 96.5% and 91.3% in the D1/D2 domain and the ITS region respectively. Physiologically the novel strain differs from N. sebacea in its ability to assimilate inulin trehalose and d-arabinose its inability to assimilate dl-lactate and its incapability of growth at 30 °C. Both phenotypic and phylogenetic analyses indicated that the isolated strain represents a novel species in the genus Naohidea and the name Naohidea akebiae fa. sp. nov. (holotype: CICC 33584; MycoBank number: MB 855585) is proposed.